epiScanpy
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Count Matrices: CT
Preprocessing: PP
episcanpy.pp.coverage_cells
episcanpy.pp.correlation_pc
episcanpy.pp.coverage_features
episcanpy.pp.density_features
episcanpy.pp.select_var_feature
episcanpy.pp.cal_var
episcanpy.pp.variability_features
episcanpy.pp.binarize
episcanpy.pp.lazy
episcanpy.pp.load_metadata
episcanpy.pp.read_ATAC_10x
episcanpy.pp.filter_cells
episcanpy.pp.filter_features
episcanpy.pp.normalize_total
episcanpy.pp.pca
episcanpy.pp.normalize_per_cell
episcanpy.pp.regress_out
episcanpy.pp.subsample
episcanpy.pp.downsample_counts
episcanpy.pp.neighbors
episcanpy.pp.sparse
episcanpy.pp.sparse
Methylation matrices
Tools: TL
Plotting: PL
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epiScanpy
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episcanpy.pp.binarize
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