Index

B

binarize() (in module episcanpy.api.pp)

bld_atac_mtx() (in module episcanpy.api.ct) build_count_mtx() (in module episcanpy.api.ct)

C

coverage_cells() (in module episcanpy.api.pp)

E

episcanpy module

episcanpy.api module

I

identify_cluster() (in module episcanpy.api.tl)

imputation_met() (in module episcanpy.api.pp)

L

lazy() (in module episcanpy.api.pp) (in module episcanpy.api.tl) load_features() (in module episcanpy.api.ct)

load_markers() (in module episcanpy.api.tl) load_met_noimput() (in module episcanpy.api.ct) (in module episcanpy.api.pp) load_metadata() (in module episcanpy.api.pp)

M

make_windows() (in module episcanpy.api.ct) module episcanpy episcanpy.api

N

name_features() (in module episcanpy.api.ct)

O

overlap_heatmap() (in module episcanpy.api.pl)

P

plot_size_features() (in module episcanpy.api.ct)

prct_overlap() (in module episcanpy.api.pl)

R

rank_features() (in module episcanpy.api.tl) read_ATAC_10x() (in module episcanpy.api.pp)

read_cyt_summary() (in module episcanpy.api.ct) readandimputematrix() (in module episcanpy.api.pp)

S

save_sparse_mtx() (in module episcanpy.api.ct) silhouette() (in module episcanpy.api.pl) (in module episcanpy.api.tl)

silhouette_tot() (in module episcanpy.api.pl) size_feature_norm() (in module episcanpy.api.ct)