EpiScanpy – Epigenomics single cell analysis in python¶
EpiScanpy is a toolkit to analyse single-cell open chromatin (scATAC-seq) and single-cell DNA methylation (for example scBS-seq) data. EpiScanpy is the epigenomic extension of the very popular scRNA-seq analysis tool Scanpy (Genome Biology, 2018) [Wolf18]. For more information, read scanpy documentation.
Report issues and access the code on GitHub.
Version 0.1.8 November 5, 2019¶
Release new processing function & quality controls.
Version 0.1.7 November 5, 2019¶
Release for SCOG epiScanpy Hackathon in Saarbrucken.
This version is not fully compatible with previous version.
Version 0.1.0 May 10, 2019¶