prct_overlap(adata, key_1, key_2, norm=False, ax_norm='row', sort_index=False)¶
% or cell count corresponding to the overlap of different cell types between 2 set of annotations/clusters.
- adata : AnnData objet
- key_1 : observational key corresponding to one cell division/ one set of clusters
- key_2 : bservational key corresponding to one cell division/ one set of clusters
- norm : normalise the ratio to the cell numbers given the total number of cells per
- in key_1 : cluster
Table containing the ratio of cells within a cluster