episcanpy.pl.rank_feat_groups_heatmap

episcanpy.pl.rank_feat_groups_heatmap(adata, groups=None, n_features=10, groupby=None, key='rank_features_groups', show=None, save=None)

Plot ranking of features using heatmap plot (see heatmap())

Parameters

adata : AnnData

Annotated data matrix.

groups : str or list of str

The groups for which to show the feature ranking.

n_features

Number of features to show.

groupby

The key of the observation grouping to consider. By default, the groupby is chosen from the rank features groups parameter but other groupby options can be used. It is expected that groupby is a categorical. If groupby is not a categorical observation, it would be subdivided into num_categories (see heatmap()).

key

Key used to store the ranking results in adata.uns.

**kwds

Are passed to heatmap().

{show_save_ax}